Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGCCCAGCCGCCTGGCTGCAGC
(((((((((((((((...(((&.))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258417
GeneSymbolARHGAP20
Binding site911,938
Score0.885
Seed1
Au0.426
Energy-25.1
Binding len22
Me-4.171
Phylopstem-0.01943582470588235
Phylopflank0.179091328
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure