Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGCAGCAAATGCTGCAAA
((((((((((((((((.....&)))))))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258417
GeneSymbolARHGAP20
Binding site2049,2072
Score0.923
Seed1
Au0.412
Energy-21.9
Binding len23
Me-3.938
Phylopstem0.07282694545454546
Phylopflank0.021032572499999954
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure