Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGCCCAGCCGCCTGGCTGCAGC
(((((((((((((((...(((&.))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258418
GeneSymbolARHGAP20
Binding site1029,1056
Score0.885
Seed1
Au0.426
Energy-25.1
Binding len22
Me-4.171
Phylopstem0.04950352176470589
Phylopflank0.06877305512499998
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure