Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCTAGAGAGGGGCA
.....(((((((((((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363659
GeneSymbolBCLAF1
Binding site5040,5058
Score0.846
Seed0
Au0.618
Energy-27.4
Binding len18
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure