Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAAGACAACTCCAGTTGCC
..(((((((.((((((..(((&)))....)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258440
GeneSymbolBLNK
Binding site935,957
Score0.846
Seed1
Au0.574
Energy-18.8
Binding len22
Me-6.2
Phylopstem2.310330985714286
Phylopflank2.1954142575
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure