Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAACGCCTCCATCACTCTGCAGGAGCAGCTGCGGG
((((((((((..(((((.(((&.))).)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258446
GeneSymbolTOP1MT
Binding site1400,1440
Score0.923
Seed1
Au0.338
Energy-23.8
Binding len23
Me-10.109
Phylopstem1.8098112999999998
Phylopflank2.8279610637499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure