Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAACGCCTCCATCACTCTGCAGGAGCAGCTGCGGG
((((((((((..(((((.(((&.))).)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258447
GeneSymbolTOP1MT
Binding site1259,1299
Score0.923
Seed1
Au0.338
Energy-23.8
Binding len23
Me-10.109
Phylopstem3.1209777
Phylopflank3.34164815875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure