Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTGGGACCGCGTGGGTCCTGGAAGAGCTGCAGA
((((((((((((((.((..((&))..)).))))))..............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258447
GeneSymbolTOP1MT
Binding site63,99
Score0.846
Seed1
Au0.353
Energy-21.3
Binding len36
Me-4.673
Phylopstem-0.32903220714285714
Phylopflank1.0449520299999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure