Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGGAAGGTCTGTACTGGGATTCATGGTACAATAACCAGCAGCTGTAT
.(((((((((((((((.....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258448
GeneSymbolPKD2L2
Binding site316,368
Score1.0
Seed1
Au0.603
Energy-22.8
Binding len18
Me-3.793
Phylopstem3.45189219375
Phylopflank2.386040155
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure