Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCGGCCCTGCC
..(((((((((((((......&))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001258450
GeneSymbolPKMYT1
Binding site188,204
Score0.923
Seed1
Au0.353
Energy-20.7
Binding len16
Me-5.19
Phylopstem2.9734722000000002
Phylopflank1.11097385
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure