Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGTG
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001259
GeneSymbolCDK6
Binding site9248,9259
Score1.0
Seed1
Au0.529
Energy-17.0
Binding len11
Me-13.224
Phylopstem0.5143601199999999
Phylopflank0.27527336375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure