Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATCACAGCCGCAGAGCAGC
((((..((((((((((...((&))...)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001260
GeneSymbolCDK8
Binding site1824,1845
Score0.846
Seed0
Au0.382
Energy-20.4
Binding len21
Me-9.958
Phylopstem5.8324619
Phylopflank6.618005250000003
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure