Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGGAGGCTGAGGCAGG
..(((.(((((((((((((...&))))))))))..))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363661
GeneSymbolHMGB1
Binding site3751,3771
Score0.846
Seed0
Au0.353
Energy-21.4
Binding len20
Me-6.858
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure