Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAAATAGAAAGTCAGTGG
((((((((..(((((((((...&))))))))).....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363661
GeneSymbolHMGB1
Binding site4896,4919
Score0.846
Seed1
Au0.544
Energy-21.3
Binding len23
Me-6.236
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure