Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATTCCTTTGTGTGCCATGGA
.((((((((((((.........&.)))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001260491
GeneSymbolSLC9A8
Binding site4852,4874
Score0.923
Seed1
Au0.441
Energy-17.4
Binding len15
Me-5.619
Phylopstem-0.5116567230769231
Phylopflank-0.09515084999999995
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end0
Position3UTR
2D Structure