Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCTGTAGTTGTT
..(((((((((((((((....&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001260491
GeneSymbolSLC9A8
Binding site4545,4562
Score1.0
Seed1
Au0.471
Energy-20.1
Binding len17
Me-4.957
Phylopstem0.06684624999999998
Phylopflank-0.12180857249999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure