Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGAAAAGAAGGCTGCGAA
((((((((....(((((((((&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363661
GeneSymbolHMGB1
Binding site580,604
Score0.846
Seed1
Au0.603
Energy-20.7
Binding len24
Me-12.408
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure