Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTGCAGGCCGCAGCCATCCTTGATGCAAA
((((((((((((((...(((.&.)))...))))))))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001260502
GeneSymbolSRP68
Binding site1488,1519
Score0.923
Seed1
Au0.426
Energy-24.1
Binding len31
Me-4.906
Phylopstem4.176483173913043
Phylopflank4.44442737875
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end4
PositionCDS
2D Structure