Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGGAGCTGCAGTTT
....((((((((((.(((((.&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001260504
GeneSymbolSTK31
Binding site893,910
Score1.0
Seed0
Au0.647
Energy-19.2
Binding len17
Me-10.282
Phylopstem2.7840116
Phylopflank3.2478663700000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure