Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGTCACTTATTTTCTTGTACACTGCAGTTGTAAC
((((((((((((((((((((.&.))))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001260506
GeneSymbolRPS3
Binding site2049,2086
Score0.923
Seed1
Au0.676
Energy-21.2
Binding len23
Me-3.938
Phylopstem-0.24653285714285725
Phylopflank0.04018029500000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure