Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGTATGTGGGA
....((((((..(((((((((&)))))))))..)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001261
GeneSymbolCDK9
Binding site2212,2230
Score0.923
Seed0
Au0.5
Energy-25.0
Binding len18
Me-15.718
Phylopstem-0.19834623333333332
Phylopflank-0.18462338750000004
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure