Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGTGGCTGCGAT
(((((((((((((.((.....&)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261
GeneSymbolCDK9
Binding site2029,2046
Score1.0
Seed1
Au0.412
Energy-21.6
Binding len17
Me-4.794
Phylopstem-1.1792517923076924
Phylopflank-0.5732802625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure