Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001261395
GeneSymbolCALCOCO2
Binding site2453,2476
Score0.923
Seed1
Au0.485
Energy-18.0
Binding len16
Me-8.406
Phylopstem-0.1238898
Phylopflank-0.07566428000000008
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure