Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGAGCAACAGCAGATGCAGC
(((((((((..(((.((((((&)))))).)))..))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261395
GeneSymbolCALCOCO2
Binding site1088,1113
Score1.0
Seed1
Au0.574
Energy-21.5
Binding len25
Me-8.74
Phylopstem0.23534364166666666
Phylopflank0.5059957112499999
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure