Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGGCCCAGCTGTCAAC
(((((((((.((((..(((.(&).)))..)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261395
GeneSymbolCALCOCO2
Binding site558,580
Score0.923
Seed1
Au0.515
Energy-18.3
Binding len22
Me-6.149
Phylopstem1.3435181399999998
Phylopflank1.454505883875
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure