Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCGCCCAAGTATCTGGGACCACAGGCGTGCAC
.((((((((((((((..((((&)))))))))))...................))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261400
GeneSymbolPSMD9
Binding site1215,1254
Score0.923
Seed1
Au0.5
Energy-19.8
Binding len39
Me-4.026
Phylopstem0.023568902647058826
Phylopflank0.031058442500000005
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end6
Position3UTR
2D Structure