Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGAACCGCAAGCTGG
...(((((((((((.(..(((&))).).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261400
GeneSymbolPSMD9
Binding site2253,2272
Score0.846
Seed0
Au0.426
Energy-19.7
Binding len19
Me-7.25
Phylopstem0.04504205000000001
Phylopflank-0.141053435
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure