Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAACAGGCGAGCTGCAT
.(((((((.((.((((.(((.&))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261406
GeneSymbolMPDZ
Binding site4279,4298
Score0.846
Seed1
Au0.529
Energy-22.8
Binding len19
Me-8.197
Phylopstem4.871701142857143
Phylopflank4.538195912275001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure