Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTTGCAAACCAAGCTGCGAG
((((((((..(((((((((((&)).))))))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261406
GeneSymbolMPDZ
Binding site394,417
Score0.923
Seed1
Au0.471
Energy-22.8
Binding len23
Me-6.236
Phylopstem0.4383042307692308
Phylopflank0.7454650312500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure