Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCTGCAACCTGCCCCATTATCCCTGGCTGCGAA
(((((((((((((((((.(((&))).))))))).))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261406
GeneSymbolMPDZ
Binding site5097,5132
Score0.923
Seed1
Au0.471
Energy-21.6
Binding len35
Me-3.938
Phylopstem4.563827948999999
Phylopflank4.318493405875001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure