Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAACTGGAGTTGCAGC
((((((((.((((((...(((&))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261406
GeneSymbolMPDZ
Binding site5937,5956
Score1.0
Seed1
Au0.574
Energy-21.2
Binding len19
Me-5.227
Phylopstem1.256316375
Phylopflank1.22969143125
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure