Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCTCACGGACACCAGCTGCGC
.((((((((..((((((((((&)))))))......)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261408
GeneSymbolBCAR3
Binding site2116,2143
Score0.923
Seed1
Au0.515
Energy-23.4
Binding len27
Me-7.861
Phylopstem1.1114185000000003
Phylopflank0.9439401275
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure