Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGTGAGCCGCAGCC
.....(((((((((....(((&))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261411
GeneSymbolSFSWAP
Binding site2781,2799
Score0.846
Seed0
Au0.294
Energy-20.0
Binding len18
Me-14.634
Phylopstem3.1436099444444445
Phylopflank2.6993854287500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure