Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATCAACGGACACTGGCTGCAGCTGCC
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261414
GeneSymbolSOX5
Binding site1304,1334
Score1.0
Seed1
Au0.412
Energy-22.1
Binding len14
Me-5.925
Phylopstem0.21703448333333333
Phylopflank0.07672178375000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure