Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATCAACGGACACTGGCTGCAGCTGCC
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261415
GeneSymbolSOX5
Binding site873,903
Score1.0
Seed1
Au0.412
Energy-22.1
Binding len14
Me-5.925
Phylopstem1.3355194083333333
Phylopflank1.5675884725000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure