Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCCTAATCAGCCTTTCTAGACCCATAGGCCTAGCTGCT
..(((((((.((((....(((&.)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261418
GeneSymbolEIF2B3
Binding site1748,1791
Score0.846
Seed1
Au0.477
Energy-19.2
Binding len20
Me-7.168
Phylopstem0.11413997142857142
Phylopflank0.5218737625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure