Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCAGCTGGAGCTA
....((((.((((((..((((&))))..)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261421
GeneSymbolOS9
Binding site250,268
Score0.846
Seed0
Au0.456
Energy-19.9
Binding len18
Me-10.836
Phylopstem1.4141104166666667
Phylopflank1.97230621875
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure