Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGTAGATGAGTGAGTCTCCTGTTACATTTCTCCTGCAGCA
.....((((((((((((((((&)))))))))..............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261425
GeneSymbolPPP1R1C
Binding site2248,2295
Score0.923
Seed0
Au0.588
Energy-19.8
Binding len47
Me-13.666
Phylopstem1.0347561260869567
Phylopflank0.9715210137499999
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure