Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCGCGCAGCTGCC
..((((((((((((.(.....&).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261427
GeneSymbolLPIN1
Binding site2122,2138
Score1.0
Seed1
Au0.412
Energy-21.2
Binding len16
Me-5.692
Phylopstem1.9748074615384614
Phylopflank2.212830811
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure