Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCCATCTCAGCTGTAC
.((((((((.(((.(((.(((&))).))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261435
GeneSymbolCDK15
Binding site1250,1271
Score1.0
Seed1
Au0.5
Energy-20.7
Binding len21
Me-5.893
Phylopstem2.1397437
Phylopflank2.4636285949999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure