Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAGTCTCCGTGGTCAGATCCTCCTCTTTGGGAGTCCAGTGT
((((((((((((((((((....&))))))).........................))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330677
GeneSymbolTBX15
Binding site2397,2442
Score0.846
Seed1
Au0.544
Energy-25.3
Binding len45
Me-3.938
Phylopstem5.32930459090909
Phylopflank5.9754236375000005
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end4
Position3UTR
2D Structure