Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGCCGTCTCTGATTCTCCCTTTATGAAGCTGCAGG
((((((((((((((((..(((&)))))))))))....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261444
GeneSymbolGNAL
Binding site1078,1118
Score0.923
Seed1
Au0.426
Energy-22.1
Binding len40
Me-3.938
Phylopstem0.4342689333333334
Phylopflank0.482316018
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end6
Position3UTR
2D Structure