Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACCACAGCTCAGA
(((.(((((.(((((((....&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261462
GeneSymbolSPRTN
Binding site2310,2327
Score1.0
Seed0
Au0.574
Energy-19.9
Binding len17
Me-8.212
Phylopstem-0.2829127142857143
Phylopflank0.37074166000000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure