Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGCCGGGCTGCC
..((((((.(((((((.((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261816
GeneSymbolPDPK1
Binding site1556,1574
Score0.846
Seed1
Au0.25
Energy-24.7
Binding len18
Me-6.013
Phylopstem0.48341597142857146
Phylopflank2.56713386
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure