Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGAGATCGCAGCTGCT
..((((((((((((...((((&))))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261816
GeneSymbolPDPK1
Binding site5870,5891
Score0.923
Seed1
Au0.485
Energy-23.6
Binding len21
Me-5.925
Phylopstem-0.14571220833333334
Phylopflank-0.09152615625000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure