Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGAACCCGGCTGCAGG
(((((((((.((((.(.....&).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261819
GeneSymbolTCP11
Binding site944,960
Score0.923
Seed1
Au0.412
Energy-20.2
Binding len16
Me-5.916
Phylopstem1.5128333333333335
Phylopflank1.2164236387500003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure