Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTGTTCTCAACTGTGGTTGCC
..(((((((((((((..(((.&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261827
GeneSymbolMS4A14
Binding site2777,2802
Score0.846
Seed1
Au0.588
Energy-18.7
Binding len18
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure