Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAACAACCGCTGACTCCAGGATTGCAT
.(((((((((((((((..(((&))).))))))))........)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261832
GeneSymbolASH2L
Binding site2159,2188
Score0.923
Seed1
Au0.485
Energy-18.8
Binding len29
Me-3.793
Phylopstem0.18806910833333332
Phylopflank0.13889161875000006
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure