Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGTGGCTACTGTGGCTGCC
..(((((((((((.((.....&.)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261833
GeneSymbolJRKL
Binding site1443,1464
Score1.0
Seed1
Au0.618
Energy-19.6
Binding len16
Me-5.814
Phylopstem3.853816363636364
Phylopflank2.0178558969999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure