Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACATTTGTGTGGGTTGCAAG
((((((((((((.(((((((.&))))))).))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001261833
GeneSymbolJRKL
Binding site2342,2366
Score0.846
Seed1
Au0.618
Energy-19.1
Binding len24
Me-5.227
Phylopstem1.0680942666666664
Phylopflank1.1242975687499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure